SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Browse genes associated with cancer risk that contain miRNA related somatic mutations

Somatic mutations that alter miRNA target sites: CLASH [3 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_020808	SIPA1L2	chr1:g.232461113G>A
NM_020808	SIPA1L2	chr1:g.232461117G>A
NM_020808	SIPA1L2	chr1:g.232461123G>A

Somatic mutations that alter miRNA target sites: PAR-CLIP and HITS-CLIP [48 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_020808	SIPA1L2	chr1:g.232398212A>C
NM_020808	SIPA1L2	chr1:g.232398536G>T
NM_020808	SIPA1L2	chr1:g.232399142C>T
hsa_circ_0016908	SIPA1L2	chr1:g.232402449C>A
hsa_circ_0016912	SIPA1L2	chr1:g.232425732G>T
hsa_circ_0016912	SIPA1L2	chr1:g.232425738G>C
hsa_circ_0016912	SIPA1L2	chr1:g.232425749G>C
hsa_circ_0016912	SIPA1L2	chr1:g.232425755T>C
hsa_circ_0016912	SIPA1L2	chr1:g.232425761G>A
hsa_circ_0016913	SIPA1L2	chr1:g.232439117C>G
hsa_circ_0016913	SIPA1L2	chr1:g.232439124TGAGA>A
hsa_circ_0016913	SIPA1L2	chr1:g.232461069C>T
hsa_circ_0016915	SIPA1L2	chr1:g.232464913G>C
hsa_circ_0016915	SIPA1L2	chr1:g.232464915A>C
hsa_circ_0016915	SIPA1L2	chr1:g.232464928A>G
hsa_circ_0016915	SIPA1L2	chr1:g.232464948A>G
hsa_circ_0016915	SIPA1L2	chr1:g.232464952G>A
hsa_circ_0016915	SIPA1L2	chr1:g.232464954G>A
hsa_circ_0016915	SIPA1L2	chr1:g.232465067G>T
hsa_circ_0016915	SIPA1L2	chr1:g.232465068C>T
hsa_circ_0016915	SIPA1L2	chr1:g.232465068C>G
hsa_circ_0016915	SIPA1L2	chr1:g.232465083G>C
hsa_circ_0016915	SIPA1L2	chr1:g.232465086C>T
hsa_circ_0016915	SIPA1L2	chr1:g.232465086C>A
hsa_circ_0016915	SIPA1L2	chr1:g.232465091T>C
hsa_circ_0016916	SIPA1L2	chr1:g.232479701A>G
hsa_circ_0016916	SIPA1L2	chr1:g.232479703CTA>A
hsa_circ_0016916	SIPA1L2	chr1:g.232490996C>T
hsa_circ_0016916	SIPA1L2	chr1:g.232491000C>T
hsa_circ_0016916	SIPA1L2	chr1:g.232491014G>T
NM_020808	SIPA1L2	chr1:g.232513971G>A
NM_020808	SIPA1L2	chr1:g.232513973C>G
NM_020808	SIPA1L2	chr1:g.232514361C>A
NM_020808	SIPA1L2	chr1:g.232514564C>T
NM_020808	SIPA1L2	chr1:g.232514571C>T
NM_020808	SIPA1L2	chr1:g.232514622A>G
NM_020808	SIPA1L2	chr1:g.232514649C>A
NM_020808	SIPA1L2	chr1:g.232514652T>G
NM_020808	SIPA1L2	chr1:g.232514656T>C
NM_020808	SIPA1L2	chr1:g.232514659T>C
NM_020808	SIPA1L2	chr1:g.232514661C>T
NM_020808	SIPA1L2	chr1:g.232514662C>G
NM_020808	SIPA1L2	chr1:g.232514663T>C
NM_020808	SIPA1L2	chr1:g.232514664G>A
NM_020808	SIPA1L2	chr1:g.232514937G>A
NM_020808	SIPA1L2	chr1:g.232514938C>T
NM_020808	SIPA1L2	chr1:g.232514950C>T
NM_020808	SIPA1L2	chr1:g.232515230A>T

Somatic mutations that alter predicted mRNA-miRNA target sites [4 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_020808	SIPA1L2	chr1:g.232399030G>A
NM_020808	SIPA1L2	chr1:g.232398474A>G
NM_020808	SIPA1L2	chr1:g.232398212A>C
NM_020808	SIPA1L2	chr1:g.232398536G>T