SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_020808 |
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Gene Symbol: | SIPA1L2 |
Description: | Homo sapiens signal-induced proliferation-associated 1 like 2 (SIPA1L2), mRNA. |
Gene Location: | chr1(-):232533711-232651243 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.232398212A>C | COSN7986989 | PCSI_0048_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-18a-5p |
agcttatttCACCTTAaat |
0 | UAAGGUGC | m7a | (m6a->m7a) | no TS | -0.177000 |
-7.820000 |
hsa-miR-18b-5p |
agcttatttCACCTTAaat |
0 | UAAGGUGC | m7a | (m6a->m7a) | no TS | -0.177000 |
-4.310000 |
hsa-miR-4735-3p |
agcttatttCACCTTaaat |
0 | AAAGGUGC | m6b | Created | no TS | -0.184000 |
-0.800000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.232398474A>G | COSN15421578 | AOCS-139-19-0 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1208 |
tgaatattAACAGTGttct |
14 |
UCACUGUU | m7b | Disrupted | -0.369000 | -0.144000 |
0.010000 |
hsa-miR-2053 |
tgaatATTAACAgtgttct |
12 |
GUGUUAAU | m7b | Disrupted | -0.056000 | no TS |
-1.070000 |
hsa-miR-569 |
tgaatATTAACagtgttct |
12 |
AGUUAAUG | m6b | Disrupted | 0.005000 | no TS |
0.010000 |
hsa-miR-1208 |
tgaatattAACAGTGttct |
14 |
UCACUGUU | m7b | Disrupted | -0.369000 | -0.144000 |
0.010000 |
hsa-miR-2053 |
tgaatATTAACAgtgttct |
12 |
GUGUUAAU | m7b | Disrupted | -0.056000 | no TS |
-1.070000 |
hsa-miR-569 |
tgaatATTAACagtgttct |
12 |
AGUUAAUG | m6b | Disrupted | 0.005000 | no TS |
0.010000 |
hsa-miR-1208 |
tgaatattAACAGTGttct |
14 |
UCACUGUU | m7b | Disrupted | -0.369000 | -0.144000 |
0.010000 |
hsa-miR-2053 |
tgaatATTAACAgtgttct |
12 |
GUGUUAAU | m7b | Disrupted | -0.056000 | no TS |
-1.070000 |
hsa-miR-569 |
tgaatATTAACagtgttct |
12 |
AGUUAAUG | m6b | Disrupted | 0.005000 | no TS |
0.010000 |
hsa-miR-1208 |
tgaatattAACAGTGttct |
14 |
UCACUGUU | m7b | Disrupted | -0.369000 | -0.144000 |
0.010000 |
hsa-miR-2053 |
tgaatATTAACAgtgttct |
12 |
GUGUUAAU | m7b | Disrupted | -0.056000 | no TS |
-1.070000 |
hsa-miR-569 |
tgaatATTAACagtgttct |
12 |
AGUUAAUG | m6b | Disrupted | 0.005000 | no TS |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.232398536G>T | COSN7208195 | 8034291 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4539 |
ttaacactAGTTCAGatgc |
2 |
GCUGAACU | m7b | Disrupted | -0.224000 | no TS |
0.060000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr1:g.232399030G>A | COSN6447482 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |