SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_029714
Gene Symbol: MIR320A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.22244987G>T COSN528079 TCGA-55-8089-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6715b-3p aagctGGTTTGAGag CUCAAACC m8a Created HPTA2_1842_G5355.1_22102497
hsa-miR-6715a-3p aagcTGGTTTGagag CCAAACCA m7b Created HPTA2_1842_G5355.1_22102497
hsa-miR-616-5p aagctggTTTGAGag ACUCAAAA m6b Created HPTA2_1842_G5355.1_22102497
hsa-miR-497-3p aagcTGGTTTGagag CAAACCAC m7a Created HPTA2_1842_G5355.1_22102497
hsa-miR-371a-5p aagctgGTTTGAGag ACUCAAAC m7b Created HPTA2_1842_G5355.1_22102497
hsa-miR-371b-5p aagctggTTTGAGag ACUCAAAA m6b Created HPTA2_1842_G5355.1_22102497
hsa-miR-372-5p aagctggTTTGAGag CCUCAAAU m6b Created HPTA2_1842_G5355.1_22102497
hsa-miR-373-5p aagctggTTTGAGag ACUCAAAA m6b Created HPTA2_1842_G5355.1_22102497

Mutation Mutation ID Sample Name Cancer Type
chr8:g.22244987G>A COSN2378943 TCGA-66-2795-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5586-5p aaGCTGGATtgagag UAUCCAGC m7b (m6b->m7b) HPTA2_1842_G5355.1_22102497

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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