SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_026704
Gene Symbol: VTRNA1-2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.140719004C>T COSN14634318 8068539 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3978 tgCTTTCCAgctctt GUGGAAAG m7b (m7b->m6b) HPTA2_1504_G4357.1_140098585
hsa-miR-875-3p tgcTTTCCAGctctt CCUGGAAA m7b Disrupted HPTA2_1504_G4357.1_140098585
hsa-miR-8067 tgcTTTCTAGctctt CCUAGAAA m7b Created HPTA2_1504_G4357.1_140098585
hsa-miR-6508-5p tgcTTTCTAGctctt UCUAGAAA m7b Created HPTA2_1504_G4357.1_140098585
hsa-miR-4487 tgctttCCAGCTCTt AGAGCUGG m8a Disrupted HPTA2_1504_G4357.1_140098585

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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