SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_003925
Gene Symbol: RNU4-1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.120293129G>A COSN15076300 SM-4B296 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-628-5p tataGTCAGCActgg AUGCUGAC m7b Created HPTA2_484_G1366.1_120730919
hsa-miR-345-5p tatAGTCAGCactgg GCUGACUC m7a Created HPTA2_484_G1366.1_120730919
hsa-miR-371a-3p tatagtCGGCACTgg AAGUGCCG m7b Disrupted HPTA2_484_G1366.1_120730919
hsa-miR-512-3p tatagtCAGCACTgg AAGUGCUG m7b Created HPTA2_484_G1366.1_120730919

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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