SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_002757
Gene Symbol: RNU5B-1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.65304768T>A COSN1682383 RK063_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-3p ctaaTTTTTTGaggc ACAAAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-371b-5p ctaattTTTTGAGgc ACUCAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-373-5p ctaattTTTTGAGgc ACUCAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-616-5p ctaattTTTTGAGgc ACUCAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-95-5p ctaaTTTATTGAggc UCAAUAAA m8a Created HPRO7_1046_G1648.1_65597123
hsa-miR-3613-3p ctaaTTTTTTGaggc ACAAAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-371b-5p ctaattTTTTGAGgc ACUCAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-373-5p ctaattTTTTGAGgc ACUCAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-616-5p ctaattTTTTGAGgc ACUCAAAA m7b Disrupted HPRO7_1046_G1648.1_65597123
hsa-miR-95-5p ctaaTTTATTGAggc UCAAUAAA m8a Created HPRO7_1046_G1648.1_65597123

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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