SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_001571
Gene Symbol: RNY5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.148941512T>C COSN5651573 RK034_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-132-3p tgggttACTGTTAag UAACAGUC m7a Created HPTA2_1745_G5057.1_148638590
hsa-miR-212-3p tgggttACTGTTAag UAACAGUC m7a Created HPTA2_1745_G5057.1_148638590
hsa-miR-338-5p tgggtTATTGTTaag AACAAUAU m7a Disrupted HPTA2_1745_G5057.1_148638590
hsa-miR-132-3p tgggttACTGTTAag UAACAGUC m7a Created HPTA2_1745_G5057.1_148638590
hsa-miR-338-5p tgggtTATTGTTaag AACAAUAU m7a Disrupted HPTA2_1745_G5057.1_148638590
hsa-miR-212-3p tgggttACTGTTAag UAACAGUC m7a Created HPTA2_1745_G5057.1_148638590

Mutation Mutation ID Sample Name Cancer Type
chr7:g.148941508G>T COSN8314948 TCGA-AC-A2FM-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273d gttgTGGGTTattgt GAACCCAU m6b Disrupted HPTA2_1745_G5057.1_148638590
hsa-miR-497-3p gttGTGGTTTattgt CAAACCAC m7b Created HPTA2_1745_G5057.1_148638590
hsa-miR-95-5p gttgtggTTTATTGt UCAAUAAA m7b Created HPTA2_1745_G5057.1_148638590

Mutation Mutation ID Sample Name Cancer Type
chr7:g.148941505T>C COSN2209723 RK157_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273d agtgttgTGGGTTat GAACCCAU m6b Disrupted HPTA2_1745_G5057.1_148638590
hsa-miR-5003-5p agTGTTGTGggttat UCACAACA m7b (m7b->m6b) HPTA2_1745_G5057.1_148638590

Mutation Mutation ID Sample Name Cancer Type
chr7:g.148941489G>C COSN5651572 RK309_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-595 taaCACACTTggtcc GAAGUGUG m7b Created HPTA2_1745_G5057.1_148638590
hsa-miR-6513-3p taacACACTTGgtcc UCAAGUGU m7b Created HPTA2_1745_G5057.1_148638590
hsa-miR-892a taACACAGTtggtcc CACUGUGU m7b (m7b->m6b) HPTA2_1745_G5057.1_148638590

Mutation Mutation ID Sample Name Cancer Type
chr7:g.148941487C>T COSN5651571 RK002_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-892a gataACACAGTtggt CACUGUGU m7b Disrupted HPTA2_1745_G5057.1_148638590
hsa-miR-892a gataACACAGTtggt CACUGUGU m7b Disrupted HPTA2_1745_G5057.1_148638590

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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