SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_183419
Gene Symbol: RNF19A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.100258460G>C COSN8518027 1409_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3140-3p agCAAAAGCcgggtt AGCUUUUG m7b (m7b->m6b) HPTA2_1861_G5406.1_101270670
hsa-miR-941 agcaaaaGCCGGGTt CACCCGGC m7b Disrupted HPTA2_1861_G5406.1_101270670
hsa-miR-3119 agcAAAAGCCgggtt UGGCUUUU m7b Disrupted HPTA2_1861_G5406.1_101270670
hsa-miR-19b-2-5p aGCAAAACccgggtt AGUUUUGC m7b Created HPTA2_1861_G5406.1_101270670
hsa-miR-19b-1-5p aGCAAAACccgggtt AGUUUUGC m7b Created HPTA2_1861_G5406.1_101270670
hsa-miR-19a-5p aGCAAAACccgggtt AGUUUUGC m7b Created HPTA2_1861_G5406.1_101270670

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser