SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_152623
Gene Symbol: CDC20B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.55170716T>C COSN8871076 SNUH_G47_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-338-5p agtgTATTGTTagct AACAAUAU m7a Disrupted HPTA2_1534_G4462.1_54466546

Mutation Mutation ID Sample Name Cancer Type
chr5:g.55170601T>C COSN412986 TCGA-BP-4161-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6890-3p ctGGCAGTGtattgt CCACUGCC m7b (m7b->m6b) HPTA2_1533_G4461.1_54466435
hsa-miR-6757-3p ctggCAGTGTattgt AACACUGG m6b Disrupted HPTA2_1533_G4461.1_54466435

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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