SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_130830
Gene Symbol: LRRC15

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.194359530G>A COSM4599318 UM-SCC-2 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-2-3p cTCAGTGGTagaaga ACCACUGA m8a (m8a->m7a) HPRO7_2085_G3370.1_194080257
hsa-miR-181b-2-3p cTCAGTGAtagaaga CUCACUGA m7b Created HPRO7_2085_G3370.1_194080257
hsa-miR-181b-3p cTCAGTGAtagaaga CUCACUGA m7b Created HPRO7_2085_G3370.1_194080257
hsa-miR-34c-3p ctcAGTGATagaaga AAUCACUA m6b Created HPRO7_2085_G3370.1_194080257
hsa-miR-1255b-2-3p ctcAGTGGTagaaga AACCACUU m6b Disrupted HPRO7_2085_G3370.1_194080257
hsa-miR-1273g-3p ctCAGTGGTagaaga ACCACUGC m7a (m7a->m6a) HPRO7_2085_G3370.1_194080257
hsa-miR-181a-2-3p cTCAGTGGTagaaga ACCACUGA m8a (m8a->m7a) HPRO7_2085_G3370.1_194080257
hsa-miR-181b-2-3p cTCAGTGAtagaaga CUCACUGA m7b Created HPRO7_2085_G3370.1_194080257
hsa-miR-181b-3p cTCAGTGAtagaaga CUCACUGA m7b Created HPRO7_2085_G3370.1_194080257
hsa-miR-34c-3p ctcAGTGATagaaga AAUCACUA m6b Created HPRO7_2085_G3370.1_194080257
hsa-miR-1273g-3p ctCAGTGGTagaaga ACCACUGC m7a (m7a->m6a) HPRO7_2085_G3370.1_194080257
hsa-miR-1255b-2-3p ctcAGTGGTagaaga AACCACUU m6b Disrupted HPRO7_2085_G3370.1_194080257

Mutation Mutation ID Sample Name Cancer Type
chr3:g.194359518G>A COSM3591531 TCGA-FS-A1ZA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-3p aggGCTGATTagctc CAAUCAGC m7b Created HPRO7_2085_G3370.1_194080257
hsa-miR-634 aggGCTGGTTagctc AACCAGCA m7a Disrupted HPRO7_2085_G3370.1_194080257
hsa-miR-34a-3p aggGCTGATTagctc CAAUCAGC m7b Created HPRO7_2085_G3370.1_194080257
hsa-miR-634 aggGCTGGTTagctc AACCAGCA m7a Disrupted HPRO7_2085_G3370.1_194080257

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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