SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_033360
Gene Symbol: KRAS
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.25225684C>T COSM4169148 AA1786 [peritoneum][appendix][other][pseudomyxoma_peritonei]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p gtagacaCAAAACag AGUUUUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-19b-1-5p gtagacaCAAAACag AGUUUUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-19b-2-5p gtagacaCAAAACag AGUUUUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-2113 gtagaCACAAAacag AUUUGUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-4711-3p gtAGACACaaaacag CGUGUCUU m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-5010-3p gtagACACAAAAcag UUUUGUGU m8a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-592 gtaGACACAAaacag UUGUGUCA m7a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-599 gtaGACACAAaacag GUUGUGUC m7b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-654-3p gtAGACATAaaacag UAUGUCUG m7a (m6a->m7a) HPTA2_443_G1284.1_25378612
hsa-miR-19a-5p gtagacaCAAAACag AGUUUUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-19b-1-5p gtagacaCAAAACag AGUUUUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-19b-2-5p gtagacaCAAAACag AGUUUUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-2113 gtagaCACAAAacag AUUUGUGC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-4711-3p gtAGACACaaaacag CGUGUCUU m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-5010-3p gtagACACAAAAcag UUUUGUGU m8a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-592 gtaGACACAAaacag UUGUGUCA m7a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-599 gtaGACACAAaacag GUUGUGUC m7b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-654-3p gtAGACATAaaacag UAUGUCUG m7a (m6a->m7a) HPTA2_443_G1284.1_25378612

Mutation Mutation ID Sample Name Cancer Type
chr12:g.25225675C>T COSM4169152 AA1909 [peritoneum][appendix][other][pseudomyxoma_peritonei]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1199-5p aaacaGGCTCAGGac CCUGAGCC m8a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-1200 aaacaggCTCAGGAc CUCCUGAG m7b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-2114-3p aaacAGGCTCaggac CGAGCCUC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-3140-5p aaacaggTTCAGGac ACCUGAAU m6b Created HPTA2_443_G1284.1_25378612
hsa-miR-4324 aaacaggCTCAGGac CCCUGAGA m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-544b aaacaggCTCAGGac ACCUGAGG m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-649 aaACAGGTTcaggac AAACCUGU m7b (m6b->m7b) HPTA2_443_G1284.1_25378612
hsa-miR-6751-3p aaacaGGCTCAGgac ACUGAGCC m7b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-1199-5p aaacaGGCTCAGGac CCUGAGCC m8a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-1200 aaacaggCTCAGGAc CUCCUGAG m7b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-2114-3p aaacAGGCTCaggac CGAGCCUC m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-3140-5p aaacaggTTCAGGac ACCUGAAU m6b Created HPTA2_443_G1284.1_25378612
hsa-miR-4324 aaacaggCTCAGGac CCCUGAGA m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-544b aaacaggCTCAGGac ACCUGAGG m6b Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-649 aaACAGGTTcaggac AAACCUGU m7b (m6b->m7b) HPTA2_443_G1284.1_25378612
hsa-miR-6751-3p aaacaGGCTCAGgac ACUGAGCC m7b Disrupted HPTA2_443_G1284.1_25378612

Mutation Mutation ID Sample Name Cancer Type
chr12:g.25225664G>A COSM4169164 App291009 [large_intestine][appendix][other][low_grade_mucinous_neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2053 ggacTTAACAagaag GUGUUAAU m6b Created HPTA2_443_G1284.1_25378612
hsa-miR-4639-5p ggaCTTAGCAAgaag UUGCUAAG m8a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-578 ggacttaACAAGAAg CUUCUUGU m7b Created HPTA2_443_G1284.1_25378612
hsa-miR-2053 ggacTTAACAagaag GUGUUAAU m6b Created HPTA2_443_G1284.1_25378612
hsa-miR-4639-5p ggaCTTAGCAAgaag UUGCUAAG m8a Disrupted HPTA2_443_G1284.1_25378612
hsa-miR-578 ggacttaACAAGAAg CUUCUUGU m7b Created HPTA2_443_G1284.1_25378612

Mutation Mutation ID Sample Name Cancer Type
chr12:g.25225660G>C COSM4040967 TCGA-BR-6705-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-744-3p ttaGCAACAagttat CUGUUGCC m6b Created HPTA2_443_G1284.1_25378612
hsa-miR-744-3p ttaGCAACAagttat CUGUUGCC m6b Created HPTA2_443_G1284.1_25378612

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser