SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_032507
Gene Symbol: PGBD1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.28300843C>T COSM3623713 TCGA-EE-A2A2-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6757-5p atctCATCCCTggaa UAGGGAUG m7b Disrupted HPRO7_2550_G4123.1_28268627
hsa-miR-665 atctcatTCCTGGaa ACCAGGAG m6b Created HPRO7_2550_G4123.1_28268627
hsa-miR-6754-5p atctcaTCCCTGGaa CCAGGGAG m7a Disrupted HPRO7_2550_G4123.1_28268627
hsa-miR-6837-5p atctcatCCCTGGaa ACCAGGGC m6b Disrupted HPRO7_2550_G4123.1_28268627
hsa-miR-7113-5p atctcaTCCCTGGAa UCCAGGGA m8a Disrupted HPRO7_2550_G4123.1_28268627
hsa-miR-1255a atCTCATCCctggaa AGGAUGAG m7b (m7b->m6b) HPRO7_2550_G4123.1_28268627
hsa-miR-1255b-5p atCTCATCCctggaa CGGAUGAG m7b (m7b->m6b) HPRO7_2550_G4123.1_28268627
hsa-miR-4685-5p atctcatCCCTGGaa CCCAGGGC m6b Disrupted HPRO7_2550_G4123.1_28268627
hsa-miR-5187-5p atcTCATCCCtggaa UGGGAUGA m7b Disrupted HPRO7_2550_G4123.1_28268627

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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