SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_032432
Gene Symbol: ABLIM2
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.8005332T>C COSN1083636 TCGA-D1-A167-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4764-5p gttACATCCAacggg UGGAUGUG m7a Created HPTA2_1436_G4143.1_8007056
hsa-miR-432-3p gttaCATCCAacggg CUGGAUGG m6b Created HPTA2_1436_G4143.1_8007056

Mutation Mutation ID Sample Name Cancer Type
chr4:g.8005320T>A COSN14941338 LP6005409-DNA_F03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-95-5p gggtaTTTATTGAgc UCAAUAAA m8a Disrupted HPTA2_1436_G4143.1_8007056
hsa-miR-655-3p ggGTATTAattgagc AUAAUACA m6b Created HPTA2_1436_G4143.1_8007056
hsa-miR-4275 gggtatTAATTGagc CCAAUUAC m6b Created HPTA2_1436_G4143.1_8007056
hsa-miR-374c-5p ggGTATTAattgagc AUAAUACA m6b Created HPTA2_1436_G4143.1_8007056

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser