SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_030624
Gene Symbol: KLHL15

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.23988880C>T COSM3560494 TCGA-EE-A3AF-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-670-3p agtatttTGAGGAAt UUUCCUCA m7b Created HPTA2_2018_G5898.1_24007004
hsa-miR-616-5p agtaTTTTGAGgaat ACUCAAAA m7b Created HPTA2_2018_G5898.1_24007004
hsa-miR-373-5p agtaTTTTGAGgaat ACUCAAAA m7b Created HPTA2_2018_G5898.1_24007004
hsa-miR-372-5p agtatTTTGAGGaat CCUCAAAU m7a Created HPTA2_2018_G5898.1_24007004
hsa-miR-371b-5p agtaTTTTGAGgaat ACUCAAAA m7b Created HPTA2_2018_G5898.1_24007004
hsa-miR-1238-3p agtatttCGAGGAAt CUUCCUCG m7b Disrupted HPTA2_2018_G5898.1_24007004

Mutation Mutation ID Sample Name Cancer Type
chrX:g.23988876G>A COSM1212615 587256 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p tttCGAGGAAtgatt CUUCCUCG m7b Disrupted HPTA2_2018_G5898.1_24007004
hsa-miR-516a-5p ttTCGAGAAatgatt UUCUCGAG m7a (m6a->m7a) HPTA2_2018_G5898.1_24007004
hsa-miR-382-3p tttcgagGAATGATt AAUCAUUC m7b Disrupted HPTA2_2018_G5898.1_24007004

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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