SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_024712
Gene Symbol: ELMO3

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr16:g.67202338C>T COSN2376590 TCGA-DR-A0ZM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7843-5p gccctctCTGCCCTt GAGGGCAG m7b Disrupted HPTA2_767_G2146.1_67236239
hsa-miR-6879-5p gccctctCTGCCCTt CAGGGCAG m7b Disrupted HPTA2_767_G2146.1_67236239
hsa-miR-6856-5p gcCCTCTCTgccctt AAGAGAGG m7b (m7b->m6b) HPTA2_767_G2146.1_67236239
hsa-miR-6758-5p gcCCTCTCTgccctt UAGAGAGG m7b (m7b->m6b) HPTA2_767_G2146.1_67236239
hsa-miR-6735-5p gccctctCTGCCCTt CAGGGCAG m7b Disrupted HPTA2_767_G2146.1_67236239
hsa-miR-583 gcCCTCTTTGccctt CAAAGAGG m8a Created HPTA2_767_G2146.1_67236239
hsa-miR-4632-5p gccctctCTGCCCTt GAGGGCAG m7b Disrupted HPTA2_767_G2146.1_67236239
hsa-miR-4436b-3p gccctctCTGCCCTt CAGGGCAG m7b Disrupted HPTA2_767_G2146.1_67236239

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser