SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_018970
Gene Symbol: GPR85

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.113084128A>G COSM1755031 B63-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-147a tagCCACACAgcttg GUGUGUGG m7b Disrupted HPRO7_2927_G4701.1_112724180
hsa-miR-4474-3p tAGCCACAcagcttg UUGUGGCU m7b Disrupted HPRO7_2927_G4701.1_112724180
hsa-miR-4520-5p tagcCACGCAGcttg CCUGCGUG m7b Created HPRO7_2927_G4701.1_112724180
hsa-miR-644a taGCCACACagcttg AGUGUGGC m7b (m7b->m6b) HPRO7_2927_G4701.1_112724180
hsa-miR-6821-5p tagCCACGCAgcttg GUGCGUGG m7b Created HPRO7_2927_G4701.1_112724180
hsa-miR-6853-5p tagCCACGCagcttg AGCGUGGG m6b Created HPRO7_2927_G4701.1_112724180
hsa-miR-7108-5p taGCCACACagcttg GUGUGGCC m7a (m7a->m6a) HPRO7_2927_G4701.1_112724180

Mutation Mutation ID Sample Name Cancer Type
chr7:g.113084127C>T COSM1084153 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-147a agCCACACAgcttgt GUGUGUGG m7b (m7b->m6b) HPRO7_2927_G4701.1_112724180
hsa-miR-4491 agCCACATagcttgt AAUGUGGA m6b Created HPRO7_2927_G4701.1_112724180
hsa-miR-4657 agCCACATagcttgt AAUGUGGA m6b Created HPRO7_2927_G4701.1_112724180

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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