SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_018143
Gene Symbol: KLHL11

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.41854838C>A COSM4995742 NPC29F [upper_aerodigestive_tract][pharynx][carcinoma][nasopharyngeal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6747-5p gccagCACCCCactt AGGGGUGU m6b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-6742-5p gccagcACCCCACTt AGUGGGGU m8a Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-6737-5p gccagCACCCCActt UUGGGGUG m7b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-608 gccagCACCCCactt AGGGGUGG m6b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-4664-5p gccaGCACCCCActt UGGGGUGC m8a Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-4651 gccagCACCCCactt CGGGGUGG m6b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-4507 gccagCAACCCActt CUGGGUUG m7b Created HPTA2_852_G2377.1_40011076
hsa-miR-6819-5p gccagCACCCCActt UUGGGGUG m7b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-6812-5p gccagCACCCCActt AUGGGGUG m7b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-6793-5p gccagcAACCCACtt UGUGGGUU m7b Created HPTA2_852_G2377.1_40011076
hsa-miR-1296-3p gccagcaCCCCACTt GAGUGGGG m7b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-342-5p gccaGCACCCCactt AGGGGUGC m7b Disrupted HPTA2_852_G2377.1_40011076
hsa-miR-3940-5p gccagCAACCCACtt GUGGGUUG m8a Created HPTA2_852_G2377.1_40011076

Mutation Mutation ID Sample Name Cancer Type
chr17:g.41854819C>A COSM3733740 2P3 [pancreas][NS][pancreatic_intraepithelial_neoplasia_(PanIN)][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-2-3p tgtgtcAATATTGcc CCAAUAUU m7b Created HPTA2_852_G2377.1_40011076
hsa-miR-195-3p tgtgtcAATATTGcc CCAAUAUU m7b Created HPTA2_852_G2377.1_40011076
hsa-miR-514a-3p tGTGTCAATattgcc AUUGACAC m8a (m7a->m8a) HPTA2_852_G2377.1_40011076
hsa-miR-514b-3p tGTGTCAATattgcc AUUGACAC m8a (m7a->m8a) HPTA2_852_G2377.1_40011076

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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