SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_016529
Gene Symbol: ATP8A2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.25374513G>C COSN9744310 C0034T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-873-3p aCAGTCTCacggcat GGAGACUG m7b Created HPTA2_500_G1396.1_25948656
hsa-miR-3672 acAGTCTCAcggcat AUGAGACU m7b (m6b->m7b) HPTA2_500_G1396.1_25948656
hsa-miR-4463 aCAGTCTCacggcat GAGACUGG m7a Created HPTA2_500_G1396.1_25948656
hsa-miR-499b-5p acAGTCTGacggcat ACAGACUU m6b Disrupted HPTA2_500_G1396.1_25948656
hsa-miR-6864-3p acAGTCTCACggcat GUGAGACU m8a Created HPTA2_500_G1396.1_25948656

Mutation Mutation ID Sample Name Cancer Type
chr13:g.25374503T>C COSN6224820 RK155_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-132-3p aGACTGTTctacagt UAACAGUC m7b Disrupted HPTA2_500_G1396.1_25948656
hsa-miR-212-3p aGACTGTTctacagt UAACAGUC m7b Disrupted HPTA2_500_G1396.1_25948656
hsa-miR-4773 agaCTGTTCTacagt CAGAACAG m7b Disrupted HPTA2_500_G1396.1_25948656

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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