SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_016300
Gene Symbol: ARPP21

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.35744545T>C COSN8314500 TCGA-EW-A1OZ-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5196-5p cggtctCCTTCCCTa AGGGAAGG m8a Created HPTA2_1301_G3661.1_35786027
hsa-miR-5584-5p cggtctcTTTCCCTa CAGGGAAA m7b Disrupted HPTA2_1301_G3661.1_35786027
hsa-miR-6733-5p cggtctCTTTCCCta UGGGAAAG m7b Disrupted HPTA2_1301_G3661.1_35786027
hsa-miR-6739-5p cggtctCTTTCCCta UGGGAAAG m7b Disrupted HPTA2_1301_G3661.1_35786027
hsa-miR-9500 cggtctcCTTCCCTa AAGGGAAG m7b Created HPTA2_1301_G3661.1_35786027
hsa-miR-4311 cggTCTCTTTCccta GAAAGAGA m8a Disrupted HPTA2_1301_G3661.1_35786027
hsa-miR-3153 cggtctCTTTCCCta GGGGAAAG m7b Disrupted HPTA2_1301_G3661.1_35786027
hsa-miR-4428 cggTCTCCTTcccta CAAGGAGA m7b Created HPTA2_1301_G3661.1_35786027
hsa-miR-4533 cggtcTCCTTCCcta UGGAAGGA m7b Created HPTA2_1301_G3661.1_35786027
hsa-miR-4668-5p cggtctcTTTCCCTa AGGGAAAA m7a Disrupted HPTA2_1301_G3661.1_35786027
hsa-miR-4747-5p cggtctCCTTCCCTa AGGGAAGG m8a Created HPTA2_1301_G3661.1_35786027

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser