SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_012240
Gene Symbol: SIRT4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.120313109T>A COSN1559957 RK062_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3611 tgcCTTCACAAatga UUGUGAAG m8a Created HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4
hsa-miR-580-3p tgccTTCTCAAatga UUGAGAAU m7a Disrupted HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4
hsa-miR-605-3p TGCCTTCTcaaatga AGAAGGCA m8a Disrupted HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4
hsa-miR-6126 tGCCTTCACaaatga GUGAAGGC m8a (m7a->m8a) HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4
hsa-miR-6770-5p tgCCTTCTCAaatga UGAGAAGG m8a Disrupted HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4
hsa-miR-1253 tgcCTTCTCaaatga AGAGAAGA m6b Disrupted HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4

Mutation Mutation ID Sample Name Cancer Type
chr12:g.120313059C>A COSN8309526 TCGA-AO-A128-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p cCAGAACCTggaaca AGGUUCUG m8a (m8a->m7a) HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4
hsa-miR-4716-5p ccagAACATGGAaca UCCAUGUU m8a Created HHSJI_693_Peak4891|5|0.0889|3|NM_012240|SIRT4

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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