SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_007356
Gene Symbol: LAMB4
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.108063854C>T COSM227043 ME030T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-504-3p agGCACTCCCctgtt GGGAGUGC m8a Disrupted HPRO7_2811_G4544.1_107704307
hsa-miR-9500 aggcaCTTCCCTgtt AAGGGAAG m7b Created HPRO7_2811_G4544.1_107704307

Mutation Mutation ID Sample Name Cancer Type
chr7:g.108063852C>T COSM396226 LUAD-S01302 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1909-5p gaaGGCACTCccctg UGAGUGCC m7b Disrupted HPRO7_2811_G4544.1_107704307
hsa-miR-33b-3p gaAGGCACTcccctg CAGUGCCU m7b (m7b->m6b) HPRO7_2811_G4544.1_107704307
hsa-miR-504-3p gaagGCACTCCCctg GGGAGUGC m8a Disrupted HPRO7_2811_G4544.1_107704307
hsa-miR-515-3p gaAGGCACTCccctg GAGUGCCU m8a Disrupted HPRO7_2811_G4544.1_107704307
hsa-miR-519e-3p gaAGGCACTcccctg AAGUGCCU m7b (m7b->m6b) HPRO7_2811_G4544.1_107704307
hsa-miR-532-5p gAAGGCATtcccctg CAUGCCUU m7b Created HPRO7_2811_G4544.1_107704307
hsa-miR-6716-5p gaaggCATTCCCctg UGGGAAUG m7b Created HPRO7_2811_G4544.1_107704307
hsa-miR-6783-5p gaaggcaTTCCCCTg UAGGGGAA m7b Created HPRO7_2811_G4544.1_107704307

Mutation Mutation ID Sample Name Cancer Type
chr7:g.108063844C>T COSM4697340 T3225 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33a-3p cAAACATTGaaggca CAAUGUUU m8a (m7a->m8a) HPRO7_2811_G4544.1_107704307
hsa-miR-33a-3p cAAACATTGaaggca CAAUGUUU m8a (m7a->m8a) HPRO7_2811_G4544.1_107704307

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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