SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_006813
Gene Symbol: PNRC1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.89084327A>G COSN8514891 1920_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-297 aaattACATACAaac AUGUAUGU m7b Disrupted HHSJI_2341_Peak5326|11|0.1209|5|NM_006813|PNRC1
hsa-miR-3149 aaattaCATACAAAc UUUGUAUG m8a Disrupted HHSJI_2341_Peak5326|11|0.1209|5|NM_006813|PNRC1
hsa-miR-380-3p aaATTACATAcaaac UAUGUAAU m8a Disrupted HHSJI_2341_Peak5326|11|0.1209|5|NM_006813|PNRC1
hsa-miR-4495 aaaTTACATacaaac AAUGUAAA m6b Disrupted HHSJI_2341_Peak5326|11|0.1209|5|NM_006813|PNRC1
hsa-miR-567 aaattACATACaaac AGUAUGUU m6b Disrupted HHSJI_2341_Peak5326|11|0.1209|5|NM_006813|PNRC1
hsa-miR-675-3p aaattaCATACAaac CUGUAUGC m6b Disrupted HHSJI_2341_Peak5326|11|0.1209|5|NM_006813|PNRC1

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser