SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_006494
Gene Symbol: ERF

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.42248599G>C COSM4820092 TCGA-EK-A2RB-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-372-5p gggcTTTGAGGatga CCUCAAAU m7a Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-4766-5p gggCTTTCAGgatga UCUGAAAG m7b Created HPTA2_1028_G2818.1_42752745
hsa-miR-4793-5p gggctttCAGGATGa ACAUCCUG m7b Created HPTA2_1028_G2818.1_42752745
hsa-miR-330-3p ggGCTTTGaggatga GCAAAGCA m6b Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-5196-3p gggctttGAGGATGa UCAUCCUC m7b Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-3140-5p gggctTTCAGGatga ACCUGAAU m6b Created HPTA2_1028_G2818.1_42752745

Mutation Mutation ID Sample Name Cancer Type
chr19:g.42248589G>T COSM4078700 TCGA-BR-4292-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150a-5p gatGAGGTTGaggac CAACCUCG m7a Created HPTA2_1028_G2818.1_42752745
hsa-miR-3150b-5p gatGAGGTTGaggac CAACCUCG m7a Created HPTA2_1028_G2818.1_42752745
hsa-miR-4714-3p gatgAGGTTGaggac CCAACCUA m6b Created HPTA2_1028_G2818.1_42752745
hsa-miR-6511a-3p gatgagGGTGAGGac CCUCACCA m7a Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-6511b-3p gatgagGGTGAGGac CCUCACCA m7a Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-6784-3p gatgaGGGTGAGgac UCUCACCC m7b Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-6862-3p gatgaGGGTGAGGac CCUCACCC m8a Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-6865-3p gatGAGGGTGaggac ACACCCUC m7b Disrupted HPTA2_1028_G2818.1_42752745
hsa-miR-6891-3p GATGAGGGtgaggac CCCUCAUC m8a Disrupted HPTA2_1028_G2818.1_42752745

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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