SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_006290
Gene Symbol: TNFAIP3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.137883140T>A COSN2143505 RK065_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6507-5p tccATTCTTaatgtg GAAGAAUA m6b Disrupted HHSJI_2366_Peak33129|21|0.1688|5|NM_006290|TNFAIP3
hsa-miR-3658 tccaTTCTTAAtgtg UUUAAGAA m7b Disrupted HHSJI_2366_Peak33129|21|0.1688|5|NM_006290|TNFAIP3
hsa-miR-3653-3p tccaTTCTTAatgtg CUAAGAAG m6b Disrupted HHSJI_2366_Peak33129|21|0.1688|5|NM_006290|TNFAIP3
hsa-miR-6507-5p tccATTCTTaatgtg GAAGAAUA m6b Disrupted HHSJI_2365_Peak33129|21|0.1688|5|NM_006290|TNFAIP3
hsa-miR-3658 tccaTTCTTAAtgtg UUUAAGAA m7b Disrupted HHSJI_2365_Peak33129|21|0.1688|5|NM_006290|TNFAIP3
hsa-miR-3653-3p tccaTTCTTAatgtg CUAAGAAG m6b Disrupted HHSJI_2365_Peak33129|21|0.1688|5|NM_006290|TNFAIP3

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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