SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005346
Gene Symbol: HSPA1B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.31829857C>A COSM1329798 TCGA-29-1696-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1258 ggcCCTAACattgag AGUUAGGA m6b Created HHHSH_1648_HSPA1B|NM_005346-1|exon_utr3|-5.39546963350599|1.62085268451601
hsa-miR-33a-3p ggccctAACATTGag CAAUGUUU m7a Created HHHSH_1648_HSPA1B|NM_005346-1|exon_utr3|-5.39546963350599|1.62085268451601
hsa-miR-2909 gGCCCTAACattgag GUUAGGGC m8a (m7a->m8a) HHHSH_1648_HSPA1B|NM_005346-1|exon_utr3|-5.39546963350599|1.62085268451601
hsa-miR-1296-5p GGCCCTAAcattgag UUAGGGCC m8a Created HHHSH_1648_HSPA1B|NM_005346-1|exon_utr3|-5.39546963350599|1.62085268451601

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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