SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005121
Gene Symbol: MED13

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.61946487T>A COSM3362270 TCGA-B0-4691-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548at-5p taTAACTTTattatg AAAAGUUA m7b (m7b->m6b) HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13
hsa-miR-5692c tataactATATTATg AAUAAUAU m7b Created HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13
hsa-miR-5692b tataactATATTATg AAUAAUAU m7b Created HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13
hsa-miR-561-3p tatAACTTTattatg CAAAGUUU m6b Disrupted HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13
hsa-miR-5590-3p tataACTTTATTatg AAUAAAGU m8a Disrupted HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13
hsa-miR-142-5p tataACTTTATtatg CAUAAAGU m7b Disrupted HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13
hsa-miR-1277-5p tataacTATATTatg AAAUAUAU m6b Created HHSJI_1252_Peak7162|21|0.2525|3|NM_005121|MED13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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