SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_004961
Gene Symbol: GABRE
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.151958645A>G COSN1085072 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3164 tcAAGTCACtagtgg UGUGACUU m7b (m7b->m6b) HPTA2_2070_G6012.1_151127123
hsa-miR-4670-5p tcaaGTCGCTagtgg AAGCGACC m6b Created HPTA2_2070_G6012.1_151127123
hsa-miR-6820-3p tcAAGTCACtagtgg UGUGACUU m7b (m7b->m6b) HPTA2_2070_G6012.1_151127123

Mutation Mutation ID Sample Name Cancer Type
chrX:g.151958598G>T COSN503080 TCGA-BG-A187-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5584-5p aaatggTTCCCTagt CAGGGAAA m6b Created HPTA2_2069_G6011.1_151127062
hsa-miR-4761-3p aaatggTGCCCTagt GAGGGCAU m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-4632-5p aaatggTGCCCTagt GAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-4436b-3p aaatggTGCCCTagt CAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-593-5p aaaTGGTGCCctagt AGGCACCA m7b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-6735-5p aaatggTGCCCTagt CAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-6750-5p aaatgGTTCCCTagt CAGGGAAC m7b Created HPTA2_2069_G6011.1_151127062
hsa-miR-6822-5p aaatgGTTCCCTagt CAGGGAAC m7b Created HPTA2_2069_G6011.1_151127062
hsa-miR-6879-5p aaatggTGCCCTagt CAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-767-5p aaATGGTGCcctagt UGCACCAU m7b (m7b->m6b) HPTA2_2069_G6011.1_151127062
hsa-miR-7843-5p aaatggTGCCCTagt GAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-9500 aaatggTTCCCTagt AAGGGAAG m6b Created HPTA2_2069_G6011.1_151127062
hsa-miR-5584-5p aaatggTTCCCTagt CAGGGAAA m6b Created HPTA2_2069_G6011.1_151127062
hsa-miR-4761-3p aaatggTGCCCTagt GAGGGCAU m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-4632-5p aaatggTGCCCTagt GAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-4436b-3p aaatggTGCCCTagt CAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-593-5p aaaTGGTGCCctagt AGGCACCA m7b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-9500 aaatggTTCCCTagt AAGGGAAG m6b Created HPTA2_2069_G6011.1_151127062
hsa-miR-7843-5p aaatggTGCCCTagt GAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-767-5p aaATGGTGCcctagt UGCACCAU m7b (m7b->m6b) HPTA2_2069_G6011.1_151127062
hsa-miR-6879-5p aaatggTGCCCTagt CAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062
hsa-miR-6822-5p aaatgGTTCCCTagt CAGGGAAC m7b Created HPTA2_2069_G6011.1_151127062
hsa-miR-6750-5p aaatgGTTCCCTagt CAGGGAAC m7b Created HPTA2_2069_G6011.1_151127062
hsa-miR-6735-5p aaatggTGCCCTagt CAGGGCAG m6b Disrupted HPTA2_2069_G6011.1_151127062

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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