SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
	Home	Search	Help	Download

Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_004387
Gene Symbol:	NKX2-5

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr5:g.173235284T>A		COSN5073062	HX34T	[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-6817-5p	ggcccaATGGCAGgc	UCUGCCAU	m7b	Disrupted	HHHSH_2531_NKX2-5|NM_001166175|exon_utr5|-5.18034866559697|-0.675345712518771
hsa-miR-6747-3p	ggcccaaAGGCAGGc	UCCUGCCU	m7b	Created	HHHSH_2531_NKX2-5|NM_001166175|exon_utr5|-5.18034866559697|-0.675345712518771
hsa-miR-6727-3p	ggcccaaTGGCAGGc	UCCUGCCA	m7b	Disrupted	HHHSH_2531_NKX2-5|NM_001166175|exon_utr5|-5.18034866559697|-0.675345712518771
hsa-miR-4769-3p	ggcccaATGGCAGgc	UCUGCCAU	m7b	Disrupted	HHHSH_2531_NKX2-5|NM_001166175|exon_utr5|-5.18034866559697|-0.675345712518771
hsa-miR-4722-3p	ggcccaaTGGCAGGc	ACCUGCCA	m7b	Disrupted	HHHSH_2531_NKX2-5|NM_001166175|exon_utr5|-5.18034866559697|-0.675345712518771

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser