SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003676
Gene Symbol: DEGS1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.224190074G>A COSM3977085 951_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8079 ggcacaGATCACTtt CAGUGAUC m7b Created HPKMB_436_G485.1_224377769
hsa-miR-1245a ggcacaGATCACTTt AAGUGAUC m8a Created HPKMB_436_G485.1_224377769
hsa-miR-1914-5p gGCACAGGtcacttt CCCUGUGC m7b Disrupted HPKMB_436_G485.1_224377769
hsa-miR-6889-3p GGCACAGAtcacttt UCUGUGCC m8a Created HPKMB_436_G485.1_224377769
hsa-miR-631 ggcaCAGGTCacttt AGACCUGG m6b Disrupted HPKMB_436_G485.1_224377769

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224190065G>A COSM464007 TCGA-BP-4986-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p caataccGTGGCACa CGUGCCAC m7b Disrupted HPKMB_436_G485.1_224377769
hsa-miR-4659a-5p caatacCATGGCAca CUGCCAUG m7b Created HPKMB_436_G485.1_224377769
hsa-miR-4659b-5p caatacCATGGCAca UUGCCAUG m7b Created HPKMB_436_G485.1_224377769
hsa-miR-4715-3p caataccGTGGCACa GUGCCACC m7a Disrupted HPKMB_436_G485.1_224377769

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224190064C>T COSM1960715 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-3p tcaATACTGTggcac UACAGUAU m7b Created HPKMB_436_G485.1_224377769
hsa-miR-16-1-3p tcAATACTGtggcac CCAGUAUU m7b (m6b->m7b) HPKMB_436_G485.1_224377769
hsa-miR-3064-3p tcaatacTGTGGCAc UUGCCACA m7b Created HPKMB_436_G485.1_224377769

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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