SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003676
Gene Symbol: DEGS1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.224190074G>A COSM3977085 951_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245a ggcacaGATCACTTt AAGUGAUC m8a Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-1914-5p gGCACAGGtcacttt CCCUGUGC m7b Disrupted HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-631 ggcaCAGGTCacttt AGACCUGG m6b Disrupted HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-6889-3p GGCACAGAtcacttt UCUGUGCC m8a Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-8079 ggcacaGATCACTtt CAGUGAUC m7b Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224190065G>A COSM464007 TCGA-BP-4986-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p caataccGTGGCACa CGUGCCAC m7b Disrupted HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-4659a-5p caatacCATGGCAca CUGCCAUG m7b Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-4659b-5p caatacCATGGCAca UUGCCAUG m7b Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-4715-3p caataccGTGGCACa GUGCCACC m7a Disrupted HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224190064C>T COSM1960715 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-3p tcaATACTGTggcac UACAGUAU m7b Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-16-1-3p tcAATACTGtggcac CCAGUAUU m7b (m6b->m7b) HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119
hsa-miR-3064-3p tcaatacTGTGGCAc UUGCCACA m7b Created HHHNH_961_DEGS1|NM_003676|exon_CDS|-5.09581595149605|3.18276663798119

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224189798G>A COSM679402 TCGA-21-5782-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-3p ctGCAAAGCaatgtg CGCUUUGC m7b (m7b->m6b) HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-19a-5p ctGCAAAACaatgtg AGUUUUGC m7b (m6b->m7b) HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-19b-1-5p ctGCAAAACaatgtg AGUUUUGC m7b (m6b->m7b) HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-19b-2-5p ctGCAAAACaatgtg AGUUUUGC m7b (m6b->m7b) HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-2052 ctgCAAAACAatgtg UGUUUUGA m7a Created HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224189782C>A COSM1639735 pfg008T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p atgctGCATTTGgca UCAAAUGC m7b Created HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-3714 atgCTGCCTTtggca GAAGGCAG m7b Disrupted HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-548an atgcTGCCTTTggca AAAAGGCA m7b Disrupted HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-7853-5p atgctGCATTTGgca UCAAAUGC m7b Created HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017

Mutation Mutation ID Sample Name Cancer Type
chr1:g.224189760A>G COSM3804047 TCGA-AN-A0AK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p gctattcGTGAGATt GAUCUCAC m7b Created HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-5585-3p gCTATTCAtgagatt CUGAAUAG m7b Disrupted HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-7154-5p gctaTTCATGAgatt UUCAUGAA m7b Disrupted HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017
hsa-miR-8060 gctaTTCATGagatt CCAUGAAG m6b Disrupted HHHNH_960_DEGS1|NM_003676|exon_CDS|-6.64750852624536|1.55739102391017

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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