SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003544
Gene Symbol: HIST1H4B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027096G>C COSM3829811 TCGA-AR-A2LE-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 gatttaTCAGGAGac CUCCUGAG m7a Created HPKMB_6826_G7855.1_26027301
hsa-miR-1976 gatttatCAGGAGac CCUCCUGC m6b Created HPKMB_6826_G7855.1_26027301
hsa-miR-3653-5p gatttaTCAGGAGac CCUCCUGA m7b Created HPKMB_6826_G7855.1_26027301
hsa-miR-378a-5p gatttaTCAGGAGac CUCCUGAC m7a Created HPKMB_6826_G7855.1_26027301
hsa-miR-4279 gatttatGAGGAGAc CUCUCCUC m7b Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-6891-3p gatttATGAGGagac CCCUCAUC m6b Disrupted HPKMB_6826_G7855.1_26027301

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027091G>C COSM595607 TCGA-49-6767-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4279 atGAGGAGActcgtg CUCUCCUC m7b (m7b->m6b) HPKMB_6826_G7855.1_26027301

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027081G>A COSM1316556 LPJ114 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][follicular_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146a-5p tcgtggcGTTCTCAa UGAGAACU m7a Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-146b-5p tcgtggcGTTCTCAa UGAGAACU m7a Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-580-3p tcgtggcATTCTCAa UUGAGAAU m7b Created HPKMB_6826_G7855.1_26027301
hsa-miR-589-5p tcgtggcGTTCTCAa UGAGAACC m7a Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-7153-5p tcgtggcGTTCTCAa UGAGAACU m7a Disrupted HPKMB_6826_G7855.1_26027301

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027078C>T COSM740923 tumor_4193278 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146a-5p tggcGTTCTCAaggt UGAGAACU m7a Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-146b-5p tggcGTTCTCAaggt UGAGAACU m7a Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-548ad-3p tggCGTTTTCaaggt GAAAACGA m7a Created HPKMB_6826_G7855.1_26027301
hsa-miR-570-3p tggcGTTTTCaaggt CGAAAACA m6b Created HPKMB_6826_G7855.1_26027301
hsa-miR-589-5p tggcGTTCTCAaggt UGAGAACC m7a Disrupted HPKMB_6826_G7855.1_26027301
hsa-miR-7153-5p tggcGTTCTCAaggt UGAGAACU m7a Disrupted HPKMB_6826_G7855.1_26027301

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027072G>A COSM1442570 TCGA-AZ-6599-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-494-3p tctcaagATGTTTCt UGAAACAU m7b Created HPKMB_6826_G7855.1_26027301

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027013G>T COSM4937777 TCGA-DD-A118-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-3p agcgcaATACTGTca UACAGUAU m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-16-1-3p agcgcAATACTGtca CCAGUAUU m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-431-5p agcGCAAGACtgtca UGUCUUGC m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-4645-3p agcgcaaTACTGTCa AGACAGUA m7b Created HPKMB_6825_G7854.2_26027236

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027013G>C COSM1294206 TCGA-DS-A1OC-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-431-5p agcGCAAGACtgtca UGUCUUGC m7b Disrupted HPKMB_6825_G7854.2_26027236

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26027007C>T COSM3860881 TCGA-BR-8589-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-132-3p aGACTGTTActgcca UAACAGUC m8a (m7a->m8a) HPKMB_6825_G7854.2_26027236
hsa-miR-194-5p agaCTGTTACtgcca UGUAACAG m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-212-3p aGACTGTTActgcca UAACAGUC m8a (m7a->m8a) HPKMB_6825_G7854.2_26027236
hsa-miR-34a-5p agactgtCACTGCCa UGGCAGUG m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-34c-5p agactgtCACTGCCa AGGCAGUG m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-449a agactgtCACTGCCa UGGCAGUG m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-449b-5p agactgtCACTGCCa AGGCAGUG m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-4645-3p agACTGTCactgcca AGACAGUA m6b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-5190 agactGTCACTGcca CCAGUGAC m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-542-3p agaCTGTCACtgcca UGUGACAG m7b Disrupted HPKMB_6825_G7854.2_26027236
hsa-miR-802 agacTGTTACTGcca CAGUAACA m8a Created HPKMB_6825_G7854.2_26027236
Mutation Mutation ID Sample Name Cancer Type
chr6:g.26026997G>T COSM1734070 ACINAR11 [pancreas][NS][carcinoma][acinar_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26026997G>A COSM1684951 PC-9ER [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p tgccaTGAATGTggt AACAUUCA m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-181b-5p tgccaTGAATGTggt AACAUUCA m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-181c-5p tgccaTGAATGTggt AACAUUCA m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-181d-5p tgccaTGAATGTggt AACAUUCA m7b Created HPKMB_6825_G7854.2_26027236
hsa-miR-4262 tgccaTGAATGTggt GACAUUCA m7b Created HPKMB_6825_G7854.2_26027236

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26026968A>G COSM269315 TCGA-AA-3715-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1249-3p gtcAAGGGCGcactc ACGCCCUU m7b Created HPKMB_6824_G7854.1_26027208

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26026964A>G COSM2857572 LOVO [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4797-5p aggacgcACTCTGTa GACAGAGU m7b Disrupted HPKMB_6824_G7854.1_26027208
hsa-miR-759 aggacgCACTCTGta GCAGAGUG m7b Disrupted HPKMB_6824_G7854.1_26027208

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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