SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003543
Gene Symbol: HIST1H4H
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285495C>G COSM74912 TCGA-DK-A3WW-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 gtCATGTGTggccgt GACACAUG m7b (m6b->m7b) HPKMB_6853_G7879.2_26285756

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285461G>A COSM128173 HN_62624 [upper_aerodigestive_tract][larynx][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4287 tgggtAAGGGAGgag UCUCCCUU m7b Disrupted HPKMB_6852_G7879.1_26285698
hsa-miR-4685-3p tgggtAAGGGAGgag UCUCCCUU m7b Disrupted HPKMB_6852_G7879.1_26285698
hsa-miR-660-3p tgggtaaAGGAGGag ACCUCCUG m6b Created HPKMB_6852_G7879.1_26285698
hsa-miR-6749-3p tgggtaaGGGAGGAg CUCCUCCC m7b Disrupted HPKMB_6852_G7879.1_26285698
hsa-miR-7113-3p tgggtaAGGGAGGag CCUCCCUG m7a Disrupted HPKMB_6852_G7879.1_26285698

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285453C>T COSM74911 TCGA-13-1499-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4268 gGAGGAGCtaagcgt GGCUCCUC m7b Disrupted HPKMB_6852_G7879.1_26285698
hsa-miR-4764-3p ggaGGAGTTAAgcgt UUAACUCC m8a Created HPKMB_6852_G7879.1_26285698
hsa-miR-4804-3p ggaggaGTTAAGCgt UGCUUAAC m7b Created HPKMB_6852_G7879.1_26285698
Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285450A>G COSM1634675 RK071_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285449G>T COSM3860965 TCGA-CD-8524-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285353C>T COSM1076758 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3667-5p tttctGGTCTTatct AAAGACCC m6b Created HPKMB_6851_G7878.1_26285569
hsa-miR-4753-5p tttcTGGCCTTatct CAAGGCCA m7b Disrupted HPKMB_6851_G7878.1_26285569
hsa-miR-548ao-3p tttctGGTCTTatct AAAGACCG m6b Created HPKMB_6851_G7878.1_26285569

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285345A>G COSM3829839 TCGA-D8-A27V-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-3p cttaTCTATGAggag AUCAUAGA m7b Disrupted HPKMB_6851_G7878.1_26285569
hsa-miR-376b-3p cttaTCTATGAggag AUCAUAGA m7b Disrupted HPKMB_6851_G7878.1_26285569
hsa-miR-6891-3p cttatctATGAGGag CCCUCAUC m6b Disrupted HPKMB_6851_G7878.1_26285569
Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285246T>C COSM3729337 169 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285238G>T COSM123598 HN_62415 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4773 ggatgTGTTCTacgc CAGAACAG m6b Created HPKMB_6850_G7877.3_26285471

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285222G>A COSM3366416 TCGA-BP-4352-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-3p ctgaagcAACAGGGa CCCUGUUC m7a Created HPKMB_6849_G7877.2_26285453
hsa-miR-339-5p ctgaagcGACAGGGa UCCCUGUC m7b Disrupted HPKMB_6849_G7877.2_26285453
hsa-miR-367-5p ctgaaGCAACAGgga ACUGUUGC m7b Created HPKMB_6849_G7877.2_26285453
hsa-miR-3977 cTGAAGCAacaggga GUGCUUCA m7b Created HPKMB_6849_G7877.2_26285453

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285213G>A COSM4690460 T55 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3657 caGGGACACActctt UGUGUCCC m8a Created HPKMB_6849_G7877.2_26285453
hsa-miR-574-5p cagggaCACACTCtt UGAGUGUG m7b Created HPKMB_6849_G7877.2_26285453

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26285208C>T COSM1316035 LPJ041 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][follicular_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-5p acGCACTTTTtacgg AAAAGUGC m8a Created HPKMB_6849_G7877.2_26285453
hsa-miR-106b-5p acGCACTTTttacgg UAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453
hsa-miR-17-5p acGCACTTTttacgg CAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453
hsa-miR-20a-5p acGCACTTTttacgg UAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453
hsa-miR-20b-5p acGCACTTTttacgg CAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453
hsa-miR-4311 acgcaCTCTTTacgg GAAAGAGA m6b Disrupted HPKMB_6849_G7877.2_26285453
hsa-miR-519d-3p acGCACTTTttacgg CAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453
hsa-miR-526b-3p acGCACTTTttacgg GAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453
hsa-miR-548az-5p acgCACTTTTtacgg CAAAAGUG m7b Created HPKMB_6849_G7877.2_26285453
hsa-miR-548t-5p acgCACTTTTtacgg CAAAAGUG m7b Created HPKMB_6849_G7877.2_26285453
hsa-miR-583 acgcaCTCTTTacgg CAAAGAGG m6b Disrupted HPKMB_6849_G7877.2_26285453
hsa-miR-93-5p acGCACTTTttacgg CAAAGUGC m7b (m6b->m7b) HPKMB_6849_G7877.2_26285453

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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