SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003538
Gene Symbol: HIST1H4A
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26021986G>A COSM4803245 CHC1185T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26021970C>T COSM232486 LAU63 [skin][trunk][malignant_melanoma][nodular]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4735-3p acGCACCTTTtatgg AAAGGUGC m8a Created HHHNH_1499_HIST1H4A|NM_003538|exon_utr3|-5.41179714781059|-0.451555388506514
hsa-miR-18b-5p acGCACCTTttatgg UAAGGUGC m7b (m6b->m7b) HHHNH_1499_HIST1H4A|NM_003538|exon_utr3|-5.41179714781059|-0.451555388506514
hsa-miR-18a-5p acGCACCTTttatgg UAAGGUGC m7b (m6b->m7b) HHHNH_1499_HIST1H4A|NM_003538|exon_utr3|-5.41179714781059|-0.451555388506514

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser