SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003537
Gene Symbol: HIST1H3B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031682C>T COSM4171535 2_tFL [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1243 cATCCAGTTcgctcg AACUGGAU m8a (m7a->m8a) HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-1287-5p cATCCAGCtcgctcg UGCUGGAU m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-4487 catCCAGCTCgctcg AGAGCUGG m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031672G>T COSM353431 LUAD_E00522 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3197 gctCGCCTCattcgc GGAGGCGC m6b Created HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-3960 gctCGCCGCattcgc GGCGGCGG m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-4285 gCTCGCCGCattcgc GCGGCGAG m8a (m8a->m7a) HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-6765-5p gctCGCCTCAttcgc GUGAGGCG m7b Created HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-8072 gctCGCCGCattcgc GGCGGCGG m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031671C>T COSM2857592 HCT116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3960 ctCGCCGCattcgcg GGCGGCGG m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-4285 CTCGCCGCattcgcg GCGGCGAG m8a Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-8072 ctCGCCGCattcgcg GGCGGCGG m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031667C>T COSM3829812 TCGA-BH-A42U-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p ccGCATTTGcggaga UCAAAUGC m7b (m6b->m7b) HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-7853-5p ccGCATTTGcggaga UCAAAUGC m7b (m6b->m7b) HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031667C>G COSM3777382 TCGA-DK-A3WW-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6084 ccgcatTGGCGGAga UUCCGCCA m7b Created HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031661G>A COSM3623430 TCGA-ER-A193-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p tcgcggaGAAAGAGc ACUCUUUC m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-629-3p tcgcGGAGAAagagc GUUCUCCC m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-718 tcGCGGAAaaagagc CUUCCGCC m6b Created HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031657G>T COSM2857591 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p ggaGAAAGAGcgtaa ACUCUUUC m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-138-2-3p ggaGAAATAGCgtaa GCUAUUUC m8a Created HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-574-3p ggagaaaGAGCGTaa CACGCUCA m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-6812-3p ggagaAAGAGCGtaa CCGCUCUU m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031657G>C COSM333040 TCGA-GD-A2C5-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p ggaGAAAGAGcgtaa ACUCUUUC m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-574-3p ggagaaaGAGCGTaa CACGCUCA m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-6812-3p ggagaAAGAGCGtaa CCGCUCUU m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031655G>A COSM1581018 2292382 [haematopoietic_and_lymphoid_tissue][central_nervous_system][lymphoid_neoplasm][primary_central_nervous_system_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-574-3p agaaaGAGCGTaaat CACGCUCA m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-6812-3p agaAAGAGCGtaaat CCGCUCUU m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031654AGC>C COSM450995 TCGA-BH-A0HK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130b-5p gaGAAAGAGcgtaaatg ACUCUUUC m7b (m7b->m6b) HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-3160-5p gAGAAAGCgtaaatg GGCUUUCU m7b Created HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-4315 gaGAAAGCGtaaatg CCGCUUUC m7b (m6b->m7b) HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-574-3p gagaaaGAGCGTaaatg CACGCUCA m6b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
hsa-miR-6812-3p gagaAAGAGCGtaaatg CCGCUCUU m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274
Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031650A>G COSM4877033 TCGA-J9-A52C-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26031608C>T COSN8400295 tumor_4163639 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 aaagGCTCTTTtcag UAAAGAGC m7b Disrupted HHHNH_1495_HIST1H3B|NM_003537|exon_utr3|-3.83208653217092|0.611382845207274

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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