SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003526
Gene Symbol: HIST1H2BC
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.26123905G>A COSN15624489
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302a-5p gtTTTAAGatgcctg ACUUAAAC m6b Disrupted HPKMB_6840_G7867.1_26124130

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26123901C>T COSM4801546 CHC1183T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 taagaTGTCTGagcc CCAGACAG m6b Created HPKMB_6840_G7867.1_26124130
hsa-miR-3934-3p taagatgCCTGAGCc UGCUCAGG m7b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4269 taagaTGCCTGagcc GCAGGCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4514 taagaTGCCTGagcc ACAGGCAG m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-6715b-5p taagaTGCCTGagcc ACAGGCAC m6b Disrupted HPKMB_6840_G7867.1_26124130

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26123899T>C COSM483759 TCGA-BP-4968-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-24-3p agatgcCTGAGCCAg UGGCUCAG m8a Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-3934-3p agatgCCTGAGCcag UGCUCAGG m7b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4269 agaTGCCTGagccag GCAGGCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4284 agatgccTGAGCCag GGGCUCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4514 agaTGCCTGagccag ACAGGCAG m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-6715b-5p agaTGCCTGagccag ACAGGCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-6862-5p agATGCCCGagccag CGGGCAUG m7a (m6a->m7a) HPKMB_6840_G7867.1_26124130
hsa-miR-7112-5p agaTGCCCGagccag ACGGGCAG m6b Created HPKMB_6840_G7867.1_26124130

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26123898G>C COSM4818639 TCGA-JW-A5VJ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-149-5p gatgcctGAGCCAGc UCUGGCUC m7b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-24-3p gatgcCTGAGCCAgc UGGCUCAG m8a Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-3064-5p gatgcctCAGCCAGc UCUGGCUG m7b Created HPKMB_6840_G7867.1_26124130
hsa-miR-3934-3p gatgCCTGAGCcagc UGCUCAGG m7b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4269 gaTGCCTGagccagc GCAGGCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4284 gatgccTGAGCCagc GGGCUCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4514 gaTGCCTGagccagc ACAGGCAG m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-4649-3p gatGCCTCAGccagc UCUGAGGC m7b Created HPKMB_6840_G7867.1_26124130
hsa-miR-6504-5p gatgcctCAGCCAGc UCUGGCUG m7b Created HPKMB_6840_G7867.1_26124130
hsa-miR-6715b-5p gaTGCCTGagccagc ACAGGCAC m6b Disrupted HPKMB_6840_G7867.1_26124130
hsa-miR-7160-5p gatgCCTCAGCcagc UGCUGAGG m7b Created HPKMB_6840_G7867.1_26124130
hsa-miR-8077 gatgcCTCAGCCagc GGCUGAGU m7a Created HPKMB_6840_G7867.1_26124130

Mutation Mutation ID Sample Name Cancer Type
chr6:g.26123514G>C COSN8400319 tumor_4120193 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4259 attCCAACTaagcgt CAGUUGGG m6b Created HPKMB_6839_G7865.1_26123722
hsa-miR-4715-5p attCCAACTaagcgt AAGUUGGC m6b Created HPKMB_6839_G7865.1_26123722
hsa-miR-890 atTCCAAGTAagcgt UACUUGGA m8a Disrupted HPKMB_6839_G7865.1_26123722

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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