SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003517
Gene Symbol: HIST2H2AC
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.149886988G>A COSM145484 280 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8068 ggtcgtgACAAACAa UGUUUGUU m7a Created HPKMB_305_G331.1_149858532
hsa-miR-3064-3p ggtcGTGGCAAacaa UUGCCACA m7a Disrupted HPKMB_305_G331.1_149858532
hsa-miR-4715-3p ggtcGTGGCAaacaa GUGCCACC m6b Disrupted HPKMB_305_G331.1_149858532
hsa-miR-4776-3p ggtcgTGGCAAacaa CUUGCCAU m6b Disrupted HPKMB_305_G331.1_149858532

Mutation Mutation ID Sample Name Cancer Type
chr1:g.149886979C>G COSM4913930 TCGA-EP-A3JL-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 gtCATGTGTggtcgt GACACAUG m7b (m6b->m7b) HPKMB_305_G331.1_149858532

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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