SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003516
Gene Symbol: HIST2H2AA3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.149851467TAAG>T COSM1333712 TCGA-AZ-6598-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4739 tgCTCCCTaagaagacgg AAGGGAGG m6b Disrupted HPKMB_297_G323.1_149823011
hsa-miR-6760-5p tgCTCCCTaagaagacgg CAGGGAGA m6b Disrupted HPKMB_297_G323.1_149823011
hsa-miR-4756-5p tgCTCCCTaagaagacgg CAGGGAGG m6b Disrupted HPKMB_297_G323.1_149823011
hsa-miR-3162-5p tgCTCCCTAAgaagacgg UUAGGGAG m8a Disrupted HPKMB_297_G323.1_149823011
hsa-miR-200c-5p tgctcccTAAGACGg CGUCUUAC m7a Created HPKMB_297_G323.1_149823011
hsa-miR-1321 tgCTCCCTaagaagacgg CAGGGAGG m6b Disrupted HPKMB_297_G323.1_149823011

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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