SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003309
Gene Symbol: TSPYL1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.116278611A>G COSM3828863 TCGA-A8-A09Z-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1179 ctgcAATGCTacctg AAGCAUUC m6b Created HPKMB_7091_G8125.1_116599775
hsa-miR-196b-5p ctgcaatACTACCTg UAGGUAGU m7b Disrupted HPKMB_7091_G8125.1_116599775
hsa-miR-196a-5p ctgcaatACTACCTg UAGGUAGU m7b Disrupted HPKMB_7091_G8125.1_116599775

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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