SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003204
Gene Symbol: NFE2L1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.48051199C>T COSM3937440 ESCC-116T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5092 gggtggaCGTGGATa AAUCCACG m7b Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873

Mutation Mutation ID Sample Name Cancer Type
chr17:g.48051192G>A COSM1239577 ESO-859 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-100-5p ggggTACGGGTggac AACCCGUA m7b Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873
hsa-miR-486-5p gggGTACAGGtggac UCCUGUAC m7b Created HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873
hsa-miR-99a-5p ggggTACGGGTggac AACCCGUA m7b Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873
hsa-miR-99b-5p ggggTACGGGTGgac CACCCGUA m8a Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873

Mutation Mutation ID Sample Name Cancer Type
chr17:g.48051191C>T COSM980576 TCGA-D1-A15V-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-99b-5p tggggTACGGGTGga CACCCGUA m8a Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873
hsa-miR-99a-5p tggggTACGGGTgga AACCCGUA m7b Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873
hsa-miR-100-5p tggggTACGGGTgga AACCCGUA m7b Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873

Mutation Mutation ID Sample Name Cancer Type
chr17:g.48051166C>T COSM2697212 LOVO [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3606-5p agTTCACTAttctgc UUAGUGAA m7b (m6b->m7b) HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873
hsa-miR-4790-3p agttcACCATTCtgc UGAAUGGU m7b Disrupted HHHSH_2512_NFE2L1|NM_003204|exon_CDS|-7.52158413088904|0.866540271194873

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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