SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003199
Gene Symbol: TCF4

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr18:g.55226519T>A COSN7363321 8066553 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.55225423G>A COSN1748254 RK056_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-373-3p taagaatAGCACTTt GAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-372-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302d-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302e taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520a-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520b taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520c-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520d-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520e taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-373-3p taagaatAGCACTTt GAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-372-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302e taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302d-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302c-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302b-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302a-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-26a-2-3p taAGAATAGcacttt CCUAUUCU m7b (m6b->m7b) HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-26a-1-3p taAGAATAGcacttt CCUAUUCU m7b (m6b->m7b) HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302c-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302b-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-302a-3p taagaatAGCACTTt UAAGUGCU m7b Created HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-26a-2-3p taAGAATAGcacttt CCUAUUCU m7b (m6b->m7b) HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-26a-1-3p taAGAATAGcacttt CCUAUUCU m7b (m6b->m7b) HHSJI_1328_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520e taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520d-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520c-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520b taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4
hsa-miR-520a-3p taagaatAGCACTTt AAAGUGCU m7b Created HHSJI_1327_Peak1432|6|0.1061|3|BC031056|TCF4

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser