SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_003108
Gene Symbol: SOX11
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.5695179C>A COSN8609371 J10_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p aataatCATTGCAtc CUGCAAUG m7b Created HHHNH_3626_SOX11|NM_003108|exon_utr3|-7.3872161724515|-1.04802914352036
hsa-miR-3159 aaTAATCCTtgcatc UAGGAUUA m7b (m7b->m6b) HHHNH_3626_SOX11|NM_003108|exon_utr3|-7.3872161724515|-1.04802914352036
hsa-miR-4708-3p aataatCCTTGCatc AGCAAGGC m6b Disrupted HHHNH_3626_SOX11|NM_003108|exon_utr3|-7.3872161724515|-1.04802914352036
hsa-miR-541-5p aatAATCCTTgcatc AAAGGAUU m7b Disrupted HHHNH_3626_SOX11|NM_003108|exon_utr3|-7.3872161724515|-1.04802914352036
hsa-miR-580-5p aatAATCATTgcatc UAAUGAUU m7b Created HHHNH_3626_SOX11|NM_003108|exon_utr3|-7.3872161724515|-1.04802914352036
Mutation Mutation ID Sample Name Cancer Type
chr2:g.5694501C>A COSN1240637 HCC97T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.5694500G>T COSN8609370 J10_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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