SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002938
Gene Symbol: RNF4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.2515253A>G COSN14628351 8065126 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5008-3p actcAGCACAGaatt CCUGUGCU m7b Disrupted HPKMB_5747_G6575.1_2516982
hsa-miR-7157-3p actcAGCACAGAatt UCUGUGCU m8a Disrupted HPKMB_5747_G6575.1_2516982
hsa-miR-6889-3p actcaGCACAGAatt UCUGUGCC m7a Disrupted HPKMB_5747_G6575.1_2516982
hsa-miR-6825-3p acTCAGCGCagaatt GCGCUGAC m7a (m6a->m7a) HPKMB_5747_G6575.1_2516982
hsa-miR-6737-3p actcAGCACAGAatt UCUGUGCU m8a Disrupted HPKMB_5747_G6575.1_2516982
hsa-miR-4778-5p actcagcACAGAATt AAUUCUGU m7b Disrupted HPKMB_5747_G6575.1_2516982
hsa-miR-191-3p actcAGCGCAGaatt GCUGCGCU m7b Created HPKMB_5747_G6575.1_2516982

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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