SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_002489
Gene Symbol: NDUFA4
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr7:g.10933671T>C COSM1666282 E7 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_T_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-5p tgtggaTTACAGCaa AGCUGUAA m7b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-4679 tgtggATCACAGcaa UCUGUGAU m7b Created HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-4718 tgtggatTACAGCaa AGCUGUAC m6b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-4999-5p tgtggatTACAGCAa UGCUGUAU m7a Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-5092 tGTGGATTacagcaa AAUCCACG m7a Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-640 tgTGGATCAcagcaa AUGAUCCA m7b (m6b->m7b) HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4

Mutation Mutation ID Sample Name Cancer Type
chr7:g.10933657G>T COSM4706120 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6868-3p agctgaAGAAGGAAc UUCCUUCU m8a Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-892c-5p agCTGAATAaggaac UAUUCAGA m7a (m6a->m7a) HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-506-5p agCTGAATAaggaac UAUUCAGG m7a (m6a->m7a) HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-4778-3p agctGAAGAAGgaac UCUUCUUC m7b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-1248 agctgAAGAAGGaac ACCUUCUU m7b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-1237-3p agctgaAGAAGGAac UCCUUCUG m7a Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4

Mutation Mutation ID Sample Name Cancer Type
chr7:g.10933579C>T COSN509652
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-210-3p ccacatcCGCACAat CUGUGCGU m6b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-147b ccacatCCGCACAat GUGUGCGG m7b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-143-5p ccacatCTGCACaat GGUGCAGU m6b Created HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-105-3p ccACATCCGcacaat ACGGAUGU m7b (m7b->m6b) HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-3944-5p ccacatCTGCACAat UGUGCAGC m7a Created HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-4764-5p cCACATCCgcacaat UGGAUGUG m7b Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4
hsa-miR-6850-5p ccacaTCCGCACaat GUGCGGAA m7a Disrupted HHSJI_2400_Peak9211|56|0.5814|4|NM_002489|NDUFA4

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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