SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002402
Gene Symbol: MEST

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.130496182C>A COSN1342583 HX11T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5000-5p ctcCTGAACTcctct CAGUUCAG m7b Created HPKMB_7289_G8354.1_130136012

Mutation Mutation ID Sample Name Cancer Type
chr7:g.130496181A>T COSN1342582 HX11T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7154-3p gctcctGTCCTCCTc AGGAGGAC m8a Created HPKMB_7289_G8354.1_130136012
hsa-miR-5004-5p gctccTGTCCTCctc UGAGGACA m7b Created HPKMB_7289_G8354.1_130136012

Mutation Mutation ID Sample Name Cancer Type
chr7:g.130496140G>A COSN8314904 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p caataaCAAAAAatg CUUUUUGC m6b Created HPKMB_7288_G8353.1_130135978

Mutation Mutation ID Sample Name Cancer Type
chr7:g.130496138A>G COSN1084128 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 AGCAATAAcgaaaaa UUAUUGCU m8a Disrupted HPKMB_7288_G8353.1_130135978

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser