SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001742
Gene Symbol: CALCR
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr7:g.93483961C>T COSN15625204
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8070 gtgacATCACATata AUGUGAUU m7a Disrupted HPKMB_7449_G8537.1_93113266
hsa-miR-219b-5p gtGACATCacatata AGAUGUCC m6b Disrupted HPKMB_7449_G8537.1_93113266
hsa-miR-380-3p gtgacATTACATAta UAUGUAAU m8a Created HPKMB_7449_G8537.1_93113266
hsa-miR-513b-3p gTGACATTacatata AAAUGUCA m7b Created HPKMB_7449_G8537.1_93113266
hsa-miR-4495 gtgacaTTACATata AAUGUAAA m6b Created HPKMB_7449_G8537.1_93113266
hsa-miR-3924 gtgacatTACATATa AUAUGUAU m7a Created HPKMB_7449_G8537.1_93113266

Mutation Mutation ID Sample Name Cancer Type
chr7:g.93483953C>A COSN8517858 J76_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6882-3p acatataAGGCAGCt UGCUGCCU m7b Created HPKMB_7449_G8537.1_93113266
hsa-miR-6882-3p acatataAGGCAGCt UGCUGCCU m7b Created HPKMB_7449_G8537.1_93113266

Mutation Mutation ID Sample Name Cancer Type
chr7:g.93483947C>A COSN504984
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4686 acgGCAGATAaactg UAUCUGCU m7a Created HPKMB_7449_G8537.1_93113266
hsa-miR-4727-5p acGGCAGATaaactg AUCUGCCA m7a (m6a->m7a) HPKMB_7449_G8537.1_93113266
hsa-miR-22-3p acGGCAGCTaaactg AAGCUGCC m7b (m7b->m6b) HPKMB_7449_G8537.1_93113266

Mutation Mutation ID Sample Name Cancer Type
chr7:g.93482835A>G COSN1084526 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1305 tGTTGAAAcaatctc UUUUCAAC m7b Disrupted HPKMB_7448_G8536.1_93112145
hsa-miR-3977 tgtTGAAGCAatctc GUGCUUCA m7b Created HPKMB_7448_G8536.1_93112145
hsa-miR-4445-5p tgttgaAACAATCTc AGAUUGUU m8a Disrupted HPKMB_7448_G8536.1_93112145
hsa-miR-676-5p tGTTGAAGcaatctc UCUUCAAC m7b Created HPKMB_7448_G8536.1_93112145

Mutation Mutation ID Sample Name Cancer Type
chr7:g.93482833A>C COSN408285 TCGA-B6-A0X1-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4445-5p ttgaAACAATCTcta AGAUUGUU m8a Disrupted HPKMB_7448_G8536.1_93112145
hsa-miR-29b-2-5p ttGAAACCAtctcta CUGGUUUC m7b (m6b->m7b) HPKMB_7448_G8536.1_93112145
hsa-miR-1273f ttgaaaCCATCTCta GGAGAUGG m7b Created HPKMB_7448_G8536.1_93112145
hsa-miR-4708-5p ttgaaacCATCTCTa AGAGAUGC m7a Created HPKMB_7448_G8536.1_93112145
hsa-miR-5186 ttgaaaCAATCTCTa AGAGAUUG m8a Disrupted HPKMB_7448_G8536.1_93112145
hsa-miR-6088 ttgaaacCATCTCTa AGAGAUGA m7a Created HPKMB_7448_G8536.1_93112145
hsa-miR-8069 ttgaAACCATCtcta GGAUGGUU m7b Created HPKMB_7448_G8536.1_93112145

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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