SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001609
Gene Symbol: ACADSB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.123051106A>G COSM203136 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-675-3p attactaGCATACAa CUGUAUGC m7b Created HPTK7_1182_G1645.1_124810629
hsa-miR-628-3p aTTACTAGcatacaa UCUAGUAA m7b Created HPTK7_1182_G1645.1_124810629
hsa-miR-567 attactAACATACaa AGUAUGUU m7b Disrupted HPTK7_1182_G1645.1_124810629
hsa-miR-449c-3p attACTAGCAtacaa UUGCUAGU m7b Created HPTK7_1182_G1645.1_124810629
hsa-miR-3146 attaCTAGCATacaa CAUGCUAG m7b Created HPTK7_1182_G1645.1_124810629
hsa-miR-297 attactaACATACAa AUGUAUGU m7b Disrupted HPTK7_1182_G1645.1_124810629

Mutation Mutation ID Sample Name Cancer Type
chr10:g.123051102A>G COSM1346520 TCGA-G4-6310-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4766-3p caagATTGCTAacat AUAGCAAU m7b Created HPTK7_1182_G1645.1_124810629
hsa-miR-4703-5p caagATTGCTAacat UAGCAAUA m7a Created HPTK7_1182_G1645.1_124810629
hsa-miR-3942-5p caagATTGCTaacat AAGCAAUA m6b Created HPTK7_1182_G1645.1_124810629
hsa-miR-3908 caagATTGCTaacat GAGCAAUG m6b Created HPTK7_1182_G1645.1_124810629

Mutation Mutation ID Sample Name Cancer Type
chr10:g.123051101T>G COSM41001 Br14X [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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