SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001514 |
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Gene Symbol: | GTF2B |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.88860151C>A | COSM1344710 | TCGA-AA-3496-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-let-7b-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7c-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7d-5p | tCTACCTCgaaatat | AGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7e-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7f-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7g-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7i-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-let-7a-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-miR-331-5p | tcTACCTAGaaatat | CUAGGUAU | m7a | (m6a->m7a) | HPKMB_677_G758.1_89325842 |
hsa-miR-4458 | tCTACCTCgaaatat | AGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-miR-4500 | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
hsa-miR-98-5p | tCTACCTCgaaatat | UGAGGUAG | m7b | Disrupted | HPKMB_677_G758.1_89325842 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.88860150G>T | COSM1344709 | TCGA-AA-3713-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-877-5p | ctaCCTCTAaatata | GUAGAGGA | m6b | Created | HPKMB_677_G758.1_89325842 |
hsa-miR-202-3p | cTACCTCTaaatata | AGAGGUAU | m7a | Created | HPKMB_677_G758.1_89325842 |
hsa-miR-6866-5p | ctaCCTCTAAatata | UUAGAGGC | m7a | Created | HPKMB_677_G758.1_89325842 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.88860150G>A | COSM32382 | Mx41 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1304-5p | ctaCCTCAAAatata | UUUGAGGC | m7a | Created | HPKMB_677_G758.1_89325842 |
hsa-miR-8055 | ctacCTCAAAatata | CUUUGAGC | m6b | Created | HPKMB_677_G758.1_89325842 |