SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001400
Gene Symbol: S1PR1
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.101241252C>A COSN1085677 HX12T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6892-5p tcttgtgCCCTTAaa GUAAGGGA m6b Disrupted HHSJI_134_Peak29200|12|0.2|4|NM_001400|S1PR1
hsa-miR-513b-5p tCTTGTGAccttaaa UUCACAAG m7b Created HHSJI_134_Peak29200|12|0.2|4|NM_001400|S1PR1
hsa-miR-3974 tcttgTGACCTTaaa AAAGGUCA m7b Created HHSJI_134_Peak29200|12|0.2|4|NM_001400|S1PR1
hsa-miR-370-5p tcttGTGACCTtaaa CAGGUCAC m7b Created HHSJI_134_Peak29200|12|0.2|4|NM_001400|S1PR1

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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