SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001305102
Gene Symbol: STK38

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.36521789G>C COSM3777610 TCGA-BT-A3PJ-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-455-5p gatacGGCACATgtg UAUGUGCC m7b Created HPKMB_6995_G8008.1_36489572
hsa-miR-6834-3p gatacGGGACATgtg UAUGUCCC m7b Disrupted HPKMB_6995_G8008.1_36489572
hsa-miR-4449 gataCGGGACatgtg CGUCCCGG m6b Disrupted HPKMB_6995_G8008.1_36489572

Mutation Mutation ID Sample Name Cancer Type
chr6:g.36521780A>G COSM3949130 202_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-466 cATGTGTATgcaatg AUACACAU m8a (m8a->m7a) HPKMB_6995_G8008.1_36489572
hsa-miR-5689 catgTGTATGCaatg AGCAUACA m7b Disrupted HPKMB_6995_G8008.1_36489572
hsa-miR-8064 catgtGTGTGCaatg AGCACACU m6b Created HPKMB_6995_G8008.1_36489572
hsa-miR-8485 caTGTGTGTGcaatg CACACACA m8a Created HPKMB_6995_G8008.1_36489572
hsa-miR-92a-3p catgtgtGTGCAATg UAUUGCAC m7b Created HPKMB_6995_G8008.1_36489572
hsa-miR-92b-3p catgtgtGTGCAATg UAUUGCAC m7b Created HPKMB_6995_G8008.1_36489572
hsa-miR-25-3p catgtgtGTGCAATg CAUUGCAC m7b Created HPKMB_6995_G8008.1_36489572
hsa-miR-32-5p catgtgtGTGCAATg UAUUGCAC m7b Created HPKMB_6995_G8008.1_36489572
hsa-miR-367-3p catgtgtGTGCAATg AAUUGCAC m7b Created HPKMB_6995_G8008.1_36489572
hsa-miR-363-3p catgtgtGTGCAATg AAUUGCAC m7b Created HPKMB_6995_G8008.1_36489572

Mutation Mutation ID Sample Name Cancer Type
chr6:g.36521779T>A COSM3873529 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p atgtgtaTGCAATGa CAUUGCAC m7a Disrupted HPKMB_6995_G8008.1_36489572
hsa-miR-5689 atgTGTATGCaatga AGCAUACA m7b Disrupted HPKMB_6995_G8008.1_36489572

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser