SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001304
Gene Symbol: CPD

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.30466230A>T COSN8602862 3006_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p gctgctGAACTTata AAAGUUCU m6b Disrupted HHHSH_814_CPD|NM_001199775|exon_utr3|-7.87161186633385|0.494601349198579
hsa-miR-214-3p gCTGCTGTacttata ACAGCAGG m7a Created HHHSH_814_CPD|NM_001199775|exon_utr3|-7.87161186633385|0.494601349198579
hsa-miR-4291 gCTGCTGAActtata UUCAGCAG m8a (m8a->m7a) HHHSH_814_CPD|NM_001199775|exon_utr3|-7.87161186633385|0.494601349198579
hsa-miR-5000-5p gctgCTGAACTtata CAGUUCAG m7b Disrupted HHHSH_814_CPD|NM_001199775|exon_utr3|-7.87161186633385|0.494601349198579

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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